EPITOPE SUMMARY
alpha-L-Fucp-(1->3)-{alpha-D-Manp-(1->3)-[alpha-D-Manp-(1->6)]-[beta-D-Xylp-(1->2)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)}-D-GlcpNAc (epitope ID
116644
) has this structure:
CHEBI:53467
studied as part of Cry j 1 (UniProt:P18632) from Cryptomeria japonica (Japanese cedar). The epitope has these synonyms: 6-deoxy-alpha-L-galactopyranosyl-(1->3)-{alpha-D-mannopyranosyl-(1->3)-[alpha-D-mannopyranosyl-(1->6)]-[beta-D-xylopyranosyl-(1->2)]-beta-D-mannopyranosyl-(1->4)-2-acetamido-2-deoxy-beta-D-glucopyranosyl-(1->4)}-2-acetamido-2-deoxy-D-glucopyranose, alpha-L-Fuc-(1->3)-[alpha-D-Man-(1->3)-[alpha-D-Man-(1->6)]-[beta-D-Xyl-(1->2)]-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)]-D-GlcNAc, beta-D-Xyl-(1->2)-[alpha-D-Man-(1->6)]-[alpha-D-Man-(1->3)]-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-[alpha-L-Fuc-(1->3)]-D-GlcNAc, beta-D-Xylp-(1->2)-[alpha-D-Manp-(1->6)]-[alpha-D-Manp-(1->3)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)-[alpha-L-Fucp-(1->3)]-D-GlcpNAc, Manalpha1-3(Manalpha1-6)(Xylbeta1-2)Manbeta1-4GlcNAcbeta1-4(Fucalpha1-3)GlcNAc, MMXF, MMXF(3), WURCS=2.0/6,7,6/[a2122h-1x_1-5_2*NCC/3=O][a1221m-1a_1-5][a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a212h-1b_1-5][a1122h-1a_1-5]/1-2-3-4-5-6-6/a3-b1_a4-c1_c4-d1_d2-e1_d3-f1_d6-g1, Xylbeta1->2(Manalpha1->6)(Manalpha1->3)Manbeta1->4GlcNAcbeta1->4(Fucalpha1->3)GlcNAc. This epitope has been studied for immune reactivity in
5
publication(s), tested in
28
B cell assays.
CURATED EXPERIMENTAL DATA
B Cell Assay(s)
28
Assay TypePositive / All
qualitative binding
27
/
27
dissociation constant KD
1
/
1
EXTERNAL RESOURCES
ResourceLink
PubChem
44457547
GlyTouCan
G47379VH